To fulfill these objectives, we wish to make as much genotyping data as possible available to the public through the MapSeq/pf website. Our funders support such free availability of the data, and impose it as a condition for their financial support. At the same time, we also respect the wishes and rights of collaborators who put substantial efforts in the collection and submission of samples, and who should be given priority in using the data to investigate their own research questions. In these initial stage of the project, genotyping data for most of the samples is only viewable to the investigators who submitted these samples, and to their collaborators. Gradually, the data shall be released to the public, under an agreement that protects the intellectual rights of the investigators, especially their right to publish using their data, and to be appropriately credited by researchers that use the data. This agreement will follow the principles set up at the Fort Lauderdale Meeting organized by the Wellcome Trust in 2003 to discuss pre-publication data release.
For the time being, we are pleased to offer public access to 6 samples that have kindly been made public by their submitters: two clinical isolates from UK travelers, one isolate from Ghana, and three reference isolates from the Sanger Institute.
Please note that access to the genotyping data is not required for all types of analysis: you can perform PCA analysis to visualize
population structure of any set of the 189 samples in our database, since this type of analysis does not reveal the details of their
genotypes.
| Kenya | Alexis Nzila, Steffen Borrmann | KEMRI, Kilifi, Kenya |
| Mali | Abdoulaye Djimde | U of Bamako, Mali. |
| Burkina Faso | Jean-Bosco Ouedraogo | IRSS, Burkina Faso |
| Ghana | Sanjeev Krishna | St George's, London, UK |
| Sudan | David Arnot | U of Copenhagen, Denmark |
| Thailand | Francois Nosten | SMRU, Mae Sot, Thailand |
| Cambodia | Su Xin-zhuan | NIAID, Bethesda, USA |
| Papua New Guinea | Pascal Michon | PNG IMR, Papua New Guinea |
| UK (clinical samples from travelers) | Colin Sutherland | LSHTM, London, UK |
| Reference samples | Chris Newbold | WTSI, Hinxton, UK |